Publication-native relationship workbench

Begin an evidence-scoped protein analysis

Search a protein to inspect distinct pair, pathway, chain, and claim contexts. Graph proximity is never presented as direct binding or causality.

Research Settings

Discovery Mode:

Discovery Iterations: 5

More iterations = broader discovery (1=quick, 5=standard, 10=exhaustive)

Required integrity stages (locked)

Arrow validation Exact direct-link extraction Evidence validation Assertion identity deduplication Metadata synthesis Direction/sign determination Schema validation Citation verification Metadata finalization

These stages are mandatory in the frozen Session 1 plan. Legacy skip preferences are ignored by the browser and rejected by the API.

PATHWAY CONTEXT

Legacy inferred pathway assignment (disabled until Session 2)

Owner pathway operations

Production controls for pathway assignment. Every action requires owner access and an explicit confirmation.

Mode Scope

Owner access is required before production operations.